CDS

Accession Number TCMCG057C43414
gbkey CDS
Protein Id XP_018451708.1
Location complement(join(3338849..3338924,3339125..3339162,3339274..3339340,3339616..3339729,3339863..3339928,3340006..3340189,3340280..3340445,3340534..3340614,3340700..3340746,3340926..3341005,3341338..3341507))
Gene LOC108822988
GeneID 108822988
Organism Raphanus sativus

Protein

Length 362aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA344915
db_source XM_018596206.1
Definition PREDICTED: serine/arginine-rich splicing factor SR45-like isoform X2 [Raphanus sativus]

EGGNOG-MAPPER Annotation

COG_category A
Description RNA recognition motif
KEGG_TC -
KEGG_Module M00430        [VIEW IN KEGG]
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko03019        [VIEW IN KEGG]
KEGG_ko ko:K14325        [VIEW IN KEGG]
EC -
KEGG_Pathway ko03013        [VIEW IN KEGG]
ko03015        [VIEW IN KEGG]
map03013        [VIEW IN KEGG]
map03015        [VIEW IN KEGG]
GOs GO:0000375        [VIEW IN EMBL-EBI]
GO:0000377        [VIEW IN EMBL-EBI]
GO:0000398        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005654        [VIEW IN EMBL-EBI]
GO:0005730        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006396        [VIEW IN EMBL-EBI]
GO:0006397        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0007154        [VIEW IN EMBL-EBI]
GO:0007165        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008380        [VIEW IN EMBL-EBI]
GO:0009743        [VIEW IN EMBL-EBI]
GO:0009756        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010033        [VIEW IN EMBL-EBI]
GO:0010182        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016071        [VIEW IN EMBL-EBI]
GO:0016604        [VIEW IN EMBL-EBI]
GO:0016607        [VIEW IN EMBL-EBI]
GO:0023052        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0042221        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044451        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051716        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0070887        [VIEW IN EMBL-EBI]
GO:0071310        [VIEW IN EMBL-EBI]
GO:0071322        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901700        [VIEW IN EMBL-EBI]
GO:1901701        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGCGAAAGCAAGCCGTGGCCGTCGTTCACCTTCCGTCTCAGGGTCTTCATCTCGGTCCAGCTCCTCCAGATCTCGTTCCCGTTCTAGATCCCTCTCTTCTTCATCATCTCCTTCGCGGAGCGTCAGTTCCGGGAGTCGTAGTCCTCCTCCTCCACCTCGTGGAAAAAGGAAAGCTACAGAATCTCTTGTTCTCCATGTCGGTTCTCTTAGCAGGAATGTAAACGAAGACCATCTGAAAGAAATTTTTGGCAACTATGGTGAAGTTGTACACGTAGAACTTGCAATTGATCGAGCTGTTAATCTTCCAAAAGGATATGCTTATGTTGAGTTCAAGGCGAGAGCTGATGCTGAGAAAGCTCTGCTGTTTATGGATGGTGGTCAAATTGACGGAAAGGTTGTTAAAGCAAAGTTCACACTACCAGCGCGTCAGAAAGTATCTCCACCTCCTAAACCTGTCTCAGGTGTACCAAAGAGAGAGGCTCCAAAACCTGATAATGCCGCTGCTGACGTTGAGAAAGATGGGGCCGGACGCCCAAGAGAGATTTCTCCGAGAAGGCGATCACCACTACCTAGGAGATTACCTGATTCTTCCCCTCGCCGGAGGCCGAGCCCTCCTATCCGCCGTCGTGGTGATACACCATCACCACCCAGACGCAGGGCAGAATCGCCATCTAGAGGCCGTTCTCCATCTTCCCCTCCTCCAAGAAGACATAGATCTCCTCCGAGGGGCTCCCTTAGAAGAATCCGCGGCAGTCCTGTTCGAAGACGGTCTCCTCCTCCTCTAAGACGAAGGTCACCTCCAAGGAGACTACGCAGTCCTCTCAGAAGATCTCCAATCCGCAGACGTAGCCGATCCCCGATTCGTAGGCCTGTTCGCTCTCGCTCAAGATCCATCTCACCTCGCAGGGGACGAGGACCAGCTGGGAGACGTGGGAGGTCATCTTCTTATTCCAGTTCGCCAAGTCCTAGAAGTATTCCTAGGAAGATTTCGAGGAGCCGCAGTCCTAAGAGGCCACTGAGAGGAAAAAGAAGCAGCAGTAACAGTAACAGCAGCAGCAGCGGCTCACCGCCTCCCCGCAAAGCATAA
Protein:  
MAKASRGRRSPSVSGSSSRSSSSRSRSRSRSLSSSSSPSRSVSSGSRSPPPPPRGKRKATESLVLHVGSLSRNVNEDHLKEIFGNYGEVVHVELAIDRAVNLPKGYAYVEFKARADAEKALLFMDGGQIDGKVVKAKFTLPARQKVSPPPKPVSGVPKREAPKPDNAAADVEKDGAGRPREISPRRRSPLPRRLPDSSPRRRPSPPIRRRGDTPSPPRRRAESPSRGRSPSSPPPRRHRSPPRGSLRRIRGSPVRRRSPPPLRRRSPPRRLRSPLRRSPIRRRSRSPIRRPVRSRSRSISPRRGRGPAGRRGRSSSYSSSPSPRSIPRKISRSRSPKRPLRGKRSSSNSNSSSSGSPPPRKA